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Tools

Explore tools developed by and/or used in VHP4Safety.

You can search for a tool that you know using the search box below. Alternatively, you can filter the tools with respect to the case studies' flow step that they belong to and/or the regulatory question that they are associated with. Use the "Filters" button to show filter options, then "OK" to see results, and click "X" to reset the filters.

Contribution and Feedback

We welcome and appreciate any feedback on this catalog of tools or the individual tools listed in it. We also appreciate receiving requests for other tools that you are aware of and deem relevant to this catalog. For these contribution and feedback, please feel free to create an issue at our repository.

Developed by VHP Hosted by VHP
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    CellDesigner

    An intuitive user interface for creating gene-regulatory and biochemical network diagrams.

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    CompTox

    An online database for searching chemical, toxicity and exposure information.

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    COPASI

    An open-source software for simulating, analyzing and visualizing biochemical networks using a wide range of methods.

    No preview available

    cpLogD Hosted by VHP

    An online model for predicting water-octanol distribution coefficient (logD) of chemical compounds with confidence estimates.

    No preview available

    Danish (Q)SAR Database

    A freely available (Q)SAR tool for substance evaluations that includes estimates from more than 200 (Q)SARs covering a wide range of hazardous properties relevant for human health and the environment.

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    DECIMER

    An online service for automatically extracting chemical structure depictiions from PDFs and images.

    No preview available

    Endocrine Disruptome

    An open source, user friendly and web based prediction tool that uses molecular docking to predict binding of compounds to 14 different nuclear receptors.

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    European Medicines Agency Documents

    An online repository for inventarisation of official reports from the European Medicines Agency concerning chemical evaluation and safety monitoring.

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    FAIRDOMHub

    A web-accessible registry for managing, sharing and organising research data and research assets.

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    Fairspace

    An open source RDF-based data management platform for importing and exporting research-relevant metadata

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    Farmacotherapeutisch Kompas

    A Dutch online resource for gathering data on the pharmacology, adverse effects, and prices of all pharmaceutical products available in the Netherlands.

    No preview available

    Flame

    An open source web application for building predictive models from biologically annotated chemical structures using predefined workflows.